Crystal Su

Crystal Su


A new paper in Current Biology describes the development of a novel, synthetic insect-bacterial symbiosis.

The symbiotic bacteria express a red fluorescent protein that is visible through the insect cuticle, facilitating characterization of the mechanics of infection and transmission in insect tissues and cells. In addition, Su et al. engineered the bacteria to modify their ability to synthesize aromatic amino acids, which are used by the insect host to fuel cuticle strengthening. Correspondingly, insects maintaining bacteria that overproduce these nutrients exhibited stronger cuticles, signifying mutualistic function. The establishment of this synthetic symbiosis will facilitate detailed molecular genetic analysis of symbiotic interactions and presents a foundation for the use of genetically-modified symbionts in the engineering of insects that transmit diseases of medical and agricultural importance. The paper is titled “Rational engineering of a synthetic insect-bacterial mutualism.”

Red fluorescent proteins in a weevil.

Broader context
SBS Professor and Principal Investigator Colin Dale says, “the work described in the paper was catalyzed and conducted by Crystal Su, an extremely brave and dedicated graduate student in SBS, who took on this very high risk and transformative project and pushed through numerous roadblocks, doggedly refusing to take no for an answer.” Su engaged three additional labs–Golic, Rog and Gagnon–in SBS to assist with specialist techniques, highlighting the utility of interdisciplinary science and the breadth of talent and collaborative spirit that exists in SBS.

Dale views Su’s work as a “bucket list” accomplishment, “something I dreamed about while playing cricket games at Bristol University Vet School during my Ph.D. While Crystal dedicated six years of her life to bring this novel new biology to life, it’s also the product of foundational work by SBS graduate students in the decade prior, involving the identification, characterization, culture and development of genetic tools for proto-symbionts free-living bacteria that have the capability to establish stable, maternally-transmitted associations with insects.”

Synthetic Biology
Synthetic Biology focuses on utilizing engineering approaches to design and fabricate organisms (including associations and communities) that do not exist in the natural world. It can yield practical solutions for a wide range of problems in medicine, agriculture, materials and environmental sciences. In addition, it can be used to investigate the functions of natural systems, via replication and manipulation, as highlighted in the Su et al. paper. To understand its potential, it is useful to think of the contribution of synthetic approaches to other disciplines in science, most notably in chemistry, says Dale who also serves in the School of Biological Sciences as Section Head, Genetics and Evolution.

 

Read the paper in Current Biology
Read the article on Undergraduate Research in the Dale Lab

 

by David Pace, first published @biology.utah.edu

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Ants of the World

Ants of the World


Seeing the world through ants.

Known affectionately as “Ant Man” in the School of Biological Sciences at the University of Utah and beyond, John “Jack” Longino is part of a globe-spanning initiative called the Ants of the World Project that aims to generate the most complete phylogenetic tree of the ant family (Formicidae) to date.

Part of that project is Ant Course, a regularly-occurring field course on ant biology and identification. After three years of accommodating the pandemic, this year the group, involving multiple research universities, is convening in Vietnam August 1-13. During the course, the world’s ant identification experts get together to teach 24 students all about ants. Beginning in 2001, the course has been staged in the United States, Costa Rica, Venezuela, French Guiana, Peru, Uganda, Mozambique, Borneo, and Australia.

“These courses have become famous,” says Longino, “with generations of students being shaped and connected by their Ant Course experience.” The Ants of the World project, he explains, integrates teaching and research. The initiative funds three new Ant Courses in locations that are poorly known, training new generations of ant biologists while they learn about the ants of these regions.

 

John “Jack” Longino

"These courses have become famous," says Longino, "with generations of students being shaped and connected by their Ant Course experience."

 

“After a long delay due to COVID, we are finally offering our first Ant Course, in Vietnam,” says Longino of their field site in Cúc Phương National Park, just south of Hanoi. “I’m really looking forward to meeting this new group of students, interacting with Asian colleagues, and experiencing first-hand the ant fauna of Southeast Asia.” Situated in the foothills of the northern Annamite Range, the national park consists of verdant karst mountains and lush valleys with an elevation that varies from 150 meters (500 feet) to 656 m (2,152 feet) at the summit of May Bac Mountain, or Silver Cloud Mountain.

It’s all part of Ants of the World Project’s attempt to survey nearly all ant genera and just under half the described species using advanced genome reduction techniques. The result will be a comprehensive evolutionary tree of ants, out to the smallest branch tips.

The resulting data set will help researchers answer questions: Are there predictable patterns of intercontinental dispersal and diversification? Following dispersal to a new region, is there accelerated filling of morphological and climate space? How have biotas responded to climate shifts in the past? Can we predict how ants will respond to current rapid climate change?

Eurhopalothrix semicapillum, named for the hairy patches on its face.

Longino and Elaine Tan, a graduate student in the Longino lab, will be meeting up with 34 other ant specialists and ant specialists-to-be. Along with “Ant Man,” course faculty include the other principal investigators of the Ants of the World Project: Michael Branstetter (USDA-ARS), Bonnie Blaimer (Museum für Naturkunde in Berlin, Germany), Brian Fisher (California Academy of Sciences) and Philip Ward (UC Davis).

Ants of the World is a collaboration of four different institutions, including the School of Biological Sciences. Ant Course is organized and run by the California Academy of Science and is designed for scholars to share information and discover together the ants of a particular region. It applies ant biology to established areas of inquiry but also encourages students to ask new questions.

Zahra Saifee is a University of Utah intern who will be accompanying the team as a scientific communications specialist. She says of Ant Course, “it really is about the ants, what new species there are in [a particular region and] where species overlap. The team discusses their observations of what they’re doing with others across the world. The core is bringing diverse people to ‘nerd out’ about it for two weeks.”

A lot of the time in Vietnam, says Saifee, is set up just to explore and see what people will find. “Curiosity is at a premium, bringing observations to the group as a sounding board. People can bring to the group ‘rough drafts’ of research and ideas.”

This open-door approach to discovery was transformative for Rodolfo Probst, PhD, a member of the Longino lab who successfully defended his dissertation just this month. His 2013 Ant Course experience in Borneo connected him to a year’s work back east following his graduation from college before he settled into graduate school as part of Longino’s lab.

Ants are the focus of that lab’s research but it’s not just about ants. The research goals of the Longino lab involve “reciprocal illumination,” in which the latest evolutionary concepts of species formation, combined with the latest genetic tools, allow the construction of a detailed “biodiversity map” of ants. The patterns revealed in the map then inform general concepts of biological diversification.

The research has the additional benefit of allowing other researchers, like those students participating in Ant Course, to more easily identify ants. To this end, Longino helps curate a large on-line specimen and image database (Antweb.org), a major resource for ant researchers worldwide.

To study the way ants network can potentially speak to the design and character of larger eco-systems, Saifee suggests, making the study of ants more than a niche science. It propels one to look at the larger picture of life—not just its wonders, but its changes and adaptations. In short, its ecology and evolution. “There are a lot of different species [of ants] and how we organize data is key to new scientific discoveries,” concludes Saifee.

Making new discoveries about ants is important because, as subject models, they are on par with vertebrates and vascular plants as key taxa for ecology, evolutionary biology, biogeography, conservation biology, and public interest. Having a solid phylogenetic history opens entire new worlds of biological exploration, and has been achieved for vertebrates and many plants. With a little more effort, much of which is being addressed by the NSF-funded Ants of the World project, the same can be true for ants.

Ant Course in Vietnam is currently at the center of that ambition. Follow the Ant Course blog and on Twitter @AntsProject. Read the profile of graduate student Elaine Tan, who is accompanying Jack Longino to Vietnam here.

 

First published at biology.utah.edu

 

N.S.F. Director

National Science Foundation


The National Science Foundation has announced a 2-to-4-year appointment of Denise Dearing as Director for the Division of Integrative Organismal Systems.

The Division of Integrative Organismal Systems (IOS) is one of four divisions within the Directorate of Biological Sciences at the NSF. The Division Director provides vision and leadership, and contributes to NSF’s mission by supporting fundamental research to advancing our understanding of organisms as integrated units of biological organization. The Division Director also provides guidance to program officers and administrative and support staff, and assesses needs and trends, develops breakthrough opportunities, implements overall strategic planning, and policy setting.

Both the NSF and the UU are supportive of Denise continuing to participate in her on-going research program and provide mechanisms and resources to enable the research in her group to continue and advance during her time at the NSF.

Dearing is Distinguished Professor in Biology at the University of Utah and a two-term former chair of the department which was made a School in 2018 after which she became director. The research in the Dearing lab focuses on understanding how small mammals overcome challenges related to diet and disease. “Our work draws on approaches from many disciplines (e.g., physiology, ecology, pharmacology, genetics, biochemistry, ethology) and combines field and laboratory studies,” says Dearing whose research website features three current projects: Understanding the genetic underpinnings that enable ingestion of poisonous diets; Investigating the role of gut microbes in facilitating the ingestion of dietary toxins; and Rules of Resilience: Modeling impacts of host-microbe interactions during perturbations.

Dearing earned her B.S. in Biology from Eastern Connecticut State University, 1985 an M.S. in Biology from the University of Vermont in 1988, and a Ph.D. in Biology from the University of Utah in 1995. She served as Associate Dean, College of Science between 2012 and 2014.

Among her awards and honors are the 2018 Joseph Grinnell Award (American Society of Mammalogist); the 2014 C. Hart Merriam Award (American Society of Mammalogists); a 2008 Graduate Student and Postdoctoral Scholar Distinguished Mentor Award; and a 2008 Distinguished University Teaching Award (University of Utah).

 

by David Pace, first published @biology.utah.edu

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Cellular Crosslinking

Cellular Crosslinking


Structural signatures of Escherichia coli chemoreceptor signaling states revealed by cellular crosslinking

Motile bacteria are capable of swimming efficiently toward favorable chemical environments and away from inhospitable ones. This behavior–called “chemotaxis”–is frequently used by unicellular organisms for finding food.

Not surprisingly, such behaviors play important roles in establishing beneficial host symbioses and pathogenic infections. The value of understanding in detail this mechanism of directed cell migration in response to extracellular chemical signals cannot be over-stated, and Escherichia coli, commonly referred to as E. coli, has become the paradigm molecular model.

“Despite their tiny size, bacteria have evolved amazingly sophisticated protein machines for detecting and responding to changes in their environment,” says John “Sandy” Parkinson, principal investigator in the School of Biological Sciences. Caralyn Flack, a research associate in the Parkinson Lab, developed a technique for monitoring the behavior of living bacteria before and after she changed the structure of a critical signaling protein inside the cell.

Flack’s new findings were recently published in Proceedings of the National Academy of Sciences (PNAS), a peer reviewed journal of the National Academy of Sciences (NAS). The paper, titled “Structural signatures of Escherichia coli chemoreceptor signaling states revealed by cellular crosslinking,” makes an important advance in elucidating the molecular mechanism(s) of signal propagation through chemoreceptor molecules.

Caralyn Flack

"This new cellular crosslinking approach delivers unprecedented insight into receptor structural properties as the receptors function within cells"

 

“Bacteria are amazing at sensing and responding quickly to changes in their environment,” states Flack. “This makes them a great model for trying to understand transmembrane signaling.” But it turns out that changes that accompany signaling events in chemoreceptors are difficult to follow with traditional structural methods, and those techniques that do work cannot replicate the native cellular environment. To remedy that, the technique Flack developed does three things. First, it assesses behavior. Second, it changes the structure of a protein inside living bacteria, and third, it then watches the signaling behavior change in real-time. The technique, which involves “crosslinking,” she says, has proven to be “really powerful for structure-function analyses of signaling proteins.”

In essence, what Flack did was create receptor proteins with a special amino acid at a position of interest. That amino acid, cysteine, has unique chemical properties that, under the right conditions, allow it to form a covalent bond (to “crosslink”) to a nearby cysteine in the same protein or in another protein. Such crosslinks constrain the structural movements of the proteins and can change its behavior. This is how Flack was able to change the structure, and in consequence, the function of a receptor within a living cell.

The crosslinking reporter sites “enabled us to evaluate receptor output states before and after crosslink formation,” she writes. This new cellular crosslinking approach “delivers unprecedented insight into receptor structural properties as the receptors function within cells” stated one reviewer of the PNAS manuscript. Flack suggests that “similar crosslinking approaches could serve to follow signal transmission in other regions of the chemoreceptor molecule and perhaps in other signaling proteins, as well.”

Work on those topics is ongoing.

Photo: Colorized scanning electron micrograph of Escherichia coli, grown in culture and adhered to a cover slip by NIAID on Flickr

 

by David Pace, first published in biology.utah.edu.

 

PAYTON UTZMAN

Payton Utzman


Many people wouldn’t see a direct line between working on John Deere tractors in rural Washington State and working on a DNA repair enzyme that functions to prevent cancer in humans.

But that’s the unlikely trajectory of Payton Utzman BS’22 who after graduating from the School of Biological Sciences headed off to join Nabla Bio at a 15,000-square-foot state-of-the-art wet laboratory and co-working space for high-potential biotech and life science ventures at Harvard University.

“We are a small team of nine scientists,” says Utzman, “working to synthesize therapeutic antibodies that are designed by artificial intelligence. It has been an amazing experience so far learning so many new skills and applying my undergraduate research experience in such a useful way.”

 

Payton Utzman BS'22

"The elegant and candid relationship between the structure of a protein and its corresponding function resembled my understanding of how metal parts assembled into an engine can produce incredible amounts of power."

 

Granted, it wasn’t a just a bounce from the spring seat of a John Deere tractor in Pullman, WA to Boston. But Utzman’s mechanically-oriented mind found a formidably gratifying corollary in biochemistry and structural biology in the Horvath lab. “I spent my childhood weekends helping my father and grandfather maintain various tractors and machinery. By the time I graduated high school, I was a self-taught mechanic, having restored an old pickup and rebuilding the engine through the guidance of a manual,” he remembers. “When I was exposed to the microscopic world of proteins, I was amazed by the enzymatic function of these biological machines. The elegant and candid relationship between the structure of a protein and its corresponding function resembled my understanding of how metal parts assembled into an engine can produce incredible amounts of power. I was then intrigued to learn more about the world of proteins and motivated to join Dr. Horvath’s research team in learning a protein mechanistically functions to repair DNA.”

In addition to making discoveries in DNA repair, the Horvath Lab, headed up by principal investigator and SBS Associate Professor Martin Horvath, applies structural methods and biochemistry to make discoveries in Chronic Neuropathic Pain that may lead to the use of non-opioid drugs. For the DNA repair project the lab studies the atomic resolution structure of MutY, [a human gene that encodes a DNA glycosylase], to understand how this enzyme recognizes and removes Adenine in OG:A base pairs.”

Says Utzman, “to better understand the mechanism of MutY, we are interested in learning about the evolution of this enzyme over millions of years. This led us to studying MutY enzymes from microbes at The Lost City Hydrothermal Field, a site similar to conditions in which life may have been conceived on Earth.” Samples from the Lost City have been collected by another SBS professor William “Billy” Brazelton, a unique partnership with marine biology and the unique mineral structures at the bottom of the Mid-Atlantic.

From these samples containing MutY-encoding genes, Utzman and his colleagues were excited to locate microbes that survive off of energy created from a geochemical reaction involving rocks and water, one of the discoveries that would lead to a better understanding of the nature of cancer.

“One of the most valuable assets of the University of Utah is the large amount of cutting-edge research occurring on campus,” says Utzman of his four years in Utah and his seven semesters as a teaching assistant. “I am so thankful for the research opportunities given to me by the U which have paved the way for me to actually have an impact on treating disease and impacting lives.”


Video on Payton Utzman’s 2020 research - “A Structural Analysis of the LC MutY Metagenome”.

Since exchanging leather work gloves in rural America for the rubber-gloved hands of the science researcher, Utzman has learned how to think critically and solve difficult problems. “I am passionate about getting kids interested in science and showing the amazing problems we can solve by blending scientific disciplines with creativity.”

Pursuant to that interest, Utzman worked together with other dedicated STEM students at the U to found the student-led STEM Tutoring program at the U to provide free tutoring to high school students in the greater Salt Lake City area. Not surprisingly, Utzman believes that the future of medicine is molecular. And while his professional ambition is to continue studying the function of proteins to one day help develop therapeutics to treat disease, he is also driven to outreach–-both in elevating the uninitiated to the scientific method (and critical thinking) and in science communication for the public.

The U graduate is quick to reference Dr. Anthony Fauci, the physician-scientist and immunologist serving as the director of the National Institute of Allergy and Infectious Diseases and the Chief Medical Advisor to the President. During the past three years the young scientist saw Fauci as the country’s undisputed spirit guide through the coronavirus pandemic. “His perseverance to help people and communicate scientific truth is inspiring,” says Utzman who finds the short-statured but brilliant (and reportedly fit) octogenarian as his “hero.”

For Utzman, the greatest advice he can give up-and-coming scientists at the U and elsewhere, is to learn how to learn. “The pandemic was a difficult time for all of us, and it was devastating that the virus affected so many lives. I think one of the biggest take-aways from the pandemic was the importance of scientific research and clear communication with the public. My advice for other students would be to learn how to read and to understand research publications.”

Embedded now in the next chapter of his life, Utzman has secured an excellent foundation. The Beta Theta Pi was a two-time Undergraduate Research Opportunities Program (UROP) Scholar, an SBS Research Scholar in 2021 and recipient of the Continuing Student School Scholarship in 2020. Additionally, he was lead author of a paper published in the University of Utah Undergraduate Research Journal.

Though far from the farm fields outside Pullman, Washington, the grease monkey in Utzman apparently is forever. He says that despite long days at the bench studying that “elegant and candid relationship between the structure of a protein structure and its corresponding function” he can still become absorbed by those other metal parts, the ones in trucks and motorcycles that coalesce so intricately–those other machines that can kick out a lot of power, but on the level of a combustion engine.

And this just in from Beantown: Payton Utzman is working on yet another engine–training for the Boston Marathon.

At age 81, Dr. Fauci–known to “kill it” on the treadmill at the gym–would be proud.

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Biomimetic Cephalopods

Biomimetic Cephalopods


Bringing ancient animals back to life—as robots.

In a university swimming pool, scientists and their underwater cameras watch carefully as a coiled shell is released from a pair of metal tongs. The shell begins to move under its own power, giving the researchers a glimpse into what the oceans might have looked like millions of years ago when they were full of these ubiquitous animals.

This isn’t Jurassic Park, but it is an effort to learn about ancient life by recreating it. In this case, the recreations are 3-D-printed robots designed to replicate the shape and motion of ammonites, marine animals that both preceded and were contemporaneous with the dinosaurs.

 

David Peterman

"Evolution dealt them a very unique mode of locomotion after liberating them from the seafloor with a chambered, gas-filled conch. These animals are essentially rigid-bodied submarines propelled by jets of water."

 

The robotic ammonites allowed the researchers to explore questions about how shell shapes affected swimming ability. They found trade-offs between stability in the water and maneuverability, suggesting that the evolution of ammonite shells explored different designs for different advantages rather than converged toward a single best design.

“These results reiterate that there is no single optimum shell shape,” says David Peterman, a postdoctoral fellow in the University of Utah’s Department of Geology and Geophysics.

The study is published in Scientific Reports and supported by the National Science Foundation.

Bringing ammonites to “life”

For years, Peterman and Kathleen Ritterbush, assistant professor of geology and geophysics, have been exploring the hydrodynamics, or physics of moving through the water, of ancient shelled cephalopods, including ammonites. Cephalopods today include octopuses and squid, with only one group sporting an external shell—the nautiluses.

Before the current era, cephalopods with shells were everywhere. Although their rigid coiled shells would have impacted their free movement through the water, they were phenomenally successful evolution-wise, persisting for hundreds of millions of years and surviving every mass extinction.

“These properties make them excellent tools to study evolutionary biomechanics,” Peterman says, “the story of how benthic (bottom-dwelling) mollusks became among the most complex and mobile group of marine invertebrates. My broader research goal is to provide a better understanding of these enigmatic animals, their ecosystem roles, and the evolutionary processes that have shaped them.”

Peterman and Ritterbush previously built life-sized 3-D weighted models of cone-shaped cephalopod shells and found, through releasing them in pools, that the ancient animals likely lived a vertical life, bobbing up and down through the water column to find food. These models’ movements were governed solely by buoyancy and the hydrodynamics of the shell.

But Peterman has always wanted to build models more similar to living animals.

Diagram of a Biometic Cehalapod.

“I have wanted to build robots ever since I developed the first techniques to replicate hydrostatic properties in physical models, and Kathleen strongly encouraged me as well,” Peterman says. “On-board propulsion enables us to explore new questions regarding the physical constraints on the life habits of these animals.”

Buoyancy became Peterman’s chief challenge. He needed the models to be neutrally buoyant, neither floating nor sinking. He also needed the models to be water-tight, both to protect the electronics inside and to prevent leaking water from changing the delicate buoyancy balance.

But the extra work is worth it. “New questions can be investigated using these techniques,” Peterman says, “including complex jetting dynamics, coasting efficiency, and the 3-D maneuverability of particular shell shapes.”

Three kinds of shells

The researchers tested robotic ammonites with three shell shapes. They’re partially based on the shell of a modern Nautilus and modified to represent the range of ancient ammonites’ shell shapes. The model called a serpenticone had tight whorls and a narrow shell, while the sphaerocone model had few thick whorls and a wide, almost spherical shell. The third model, the oxycone, was somewhere in the middle: thick whorls and a narrow, streamlined shell. You can think of them occupying a triangular diagram, representing “end-members” of different shell characteristics.

“Every planispiral cephalopod to ever exist plots somewhere on this diagram,” Peterman says, allowing the properties for in-between shapes to be estimated.

Once the 3-D-printed models were built, rigged and weighted, it was time to go to the pool. Working first in the pool of Geology and Geophysics professor Brenda Bowen and later in the U’s Crimson Lagoon, Peterman and Ritterbush set up cameras and lights underwater and released the robotic ammonites, tracking their position in 3-D space throughout around a dozen “runs” for each shell type.

No perfect shell shape

By analyzing the data from the pool experiments, the researchers were looking for the pros and cons associated with each shell characteristic.

“We expected there to be various advantages and consequences for any particular shapes,” Peterman says. “Evolution dealt them a very unique mode of locomotion after liberating them from the seafloor with a chambered, gas-filled conch. These animals are essentially rigid-bodied submarines propelled by jets of water.” That shell isn’t great for speed or maneuverability, he says, but coiled-shell cephalopods still managed remarkable diversity through each mass extinction.

“Throughout their evolution, externally shelled cephalopods navigated their physical limitations by endlessly experimenting with variations on the shape of their coiled shells,” Peterman says.

So, which shell shape was the best?

David Peterman

“The idea that one shape is better than another is meaningless without asking the question—‘better at what?’” Peterman says. Narrower shells enjoyed less drag and more stability while traveling in one direction, improving their jetting efficiency. But wider, more spherical shells could more easily change directions, spinning on an axis. This maneuverability may have helped them catch prey or avoid slow predators (like other shelled cephalopods).

Peterman notes that some interpretations consider many ammonite shells as hydrodynamically “inferior” to others, limiting their motion too much.

“Our experiments, along with the work of colleagues in our lab, demonstrate that shell designs traditionally interpreted as hydrodynamically ‘inferior’ may have had some disadvantages but are not immobile drifters,” Peterman says. “For externally shelled cephalopods, speed is certainly not the only metric of performance.” Nearly every variation in shell design iteratively appears at some point in the fossil record, he says, showing that different shapes conferred different advantages.

“Natural selection is a dynamic process, changing through time and involving numerous functional tradeoffs and other constraints,” he says, “Externally-shelled cephalopods are perfect targets to study these complex dynamics because of their enormous temporal range, ecological significance, abundance, and high evolutionary rates.”

Find the full study @ Nature.com.

 

by Paul Gabrielsen, first published in @TheU.

 

Alex Horn

Major Alex Horn


Dr. Horn graduated from the School of Biological Sciences in August 2021. He was a member of Professor Dave Carrier’s Evolutionary Biomechanics Lab. His dissertation, which he defended last year, was titled: “The Social Dependency Hypothesis: An Evolutionary Perspective on Health and Longevity.”


USAF, C-17 Globemaster

I joined the Air Force as an 18-year-old cadet. I came to the U as part of a program that would allow me to later return to the Air Force Academy to teach.

In my doctoral studies, I wanted to understand the relationships between our evolved propensity to form intense fraternal bonds in the face of stress and our abilities to maintain health and performance amidst difficult circumstances.

I was home when I saw the first few hours of the evacuation of Afghanistan on the news. My only thought was that I needed to get over there as fast as possible to help. I was one of the last of eight C-17 crews to deploy from Travis Air Force Base, California.

After landing in Qatar, we were immediately alerted to fly a floor-load of refugees to Germany. It was a seven-hour flight, and the aircraft was full of Afghan evacuees, including many children. I was amazed at their patience and positive attitudes despite the horrible circumstances. A few days later, my crew and I evacuated some of the last military personnel from Kabul, Afghanistan, on the final day of Operation Allies Refuge.

Operation Allies Refuge

It was a seven-hour flight, and the aircraft was full of Afghan evacuees, including many children.

 

My studies helped me contextualize the experience. The famed “fight or flight” stress response is good for running away from predators in the jungle but not helpful for keeping your crew safe in combat. My research shows there’s another stress response that helps us bond and maintain our composure during extreme stress and threat; this response has yet to be fully characterized.

This operation included some of the most challenging missions of my career, and I couldn’t have done it without the bond with my team. I am humbled to have participated in the largest noncombatant evacuation in history and excited to further that experience by applying my lessons learned to science.

 

By Alex Horn, originally published at of biology.utah.edu.

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Living Legend

Toto Gets Stamped!


Filipino stamp of "Toto"

Distinguished Professor Baldomero Olivera is featured in the Filipino Postal Office’s “Living Legends” commemorative stamp series.

Affectionately referred to as “Toto,” Olivera has pioneered research on marine cone snails, demonstrating the therapeutic potential of their venom, already resulting in an FDA-approved drug. The University of Utah’s biochemistry and pharmacy departments (UofU Health) are currently expanding on some of this work.

His early research contributions include the discovery and biochemical characterization of E. coli DNA ligase, a key enzyme of DNA replication and repair that is widely used in recombinant DNA technology.

In a 2018 profile, Olivera was described as unconventional: “Not every molecular biologist would think to look in cone snail venom for potential therapeutics. But a long-held interest in the biological environment that surrounded him while growing up in the Philippines — and a habit of making unconventional choices — led Baldomero ‘Toto’ Olivera to do just that.”

After completing his Ph.D. at the California Institute of Technology and postdoctoral research at Stanford University, Olivera returned to the Philippines to establish his independent research program. Now at the School of Biological Sciences at the University of Utah, Olivera has discovered several peptides in snail venom that have reached human clinical trials. One has been approved for the treatment of severe pain.

 

Baldomero Olivera

“I didn’t make choices that were conventionally considered wise at the time. The things that didn’t seem so wise at the time turned out to be okay.”

 

While building a productive research program, he also was developing new ways to educate and inspire future generations of scientists in the U.S. and the Philippines. As a Howard Hughes Medical Institute Professor, he has developed hands-on curricula that draw young students to science by teaching them about scientific principles they can observe in the organisms they see every day.

When Olivera was selected as one in the series of “Living Legends” commemorative stamps, graduate student Paula Florez Salcedo in the Olivera lab tweeted “He is a living legend, and I can’t believe I get to learn from him!”

When asked by an interviewer to list something that Olivera knows now in his career as a scientist that he wished he’d known earlier, he says,

“I didn’t make choices that were conventionally considered wise at the time. When I was going back to the Philippines, everyone was saying ‘Why are you doing that? You’re ruining your scientific career.’ But that turned out to be very good for my scientific career because I started working with cone shells. So I really have no major regrets, I must say. The things that didn’t seem so wise at the time turned out to be okay.”

In science and technology, the post office selected to honor national scientist and physician Ernesto Domingo along with the internationally recognized Olivera.

“They have dedicated their lives and talents to the Filipino people,” Postmaster General Norman Fulgencio said in February when the announcement was made. “They deserve to be immortalized in our stamps to inspire not only Filipinos, but every nationality who will see our stamps.”

The post office turned over to representatives of the honorees the framed stamps in tribute to them. “The stamps we issued today are not only meant for delivery of letters, but more importantly to deliver hope,” Fulgencio said.

Furthermore, the stamps “symbolize what Filipinos are capable of — wherever we are, whoever we are up against and whatever it takes,” he said.

 

by David Pace, first published at biology.utah.edu.

 

Faculty Giving

Faculty Giving


My wife Tanya Williams and I are happy to be able to provide a planned gift to the School of Biological Sciences at the University of Utah. We moved to Utah in 2010 to establish my Biodiversity and Conservation Ecology laboratory. I am thankful for the research, teaching and service opportunities provided to me by the University of Utah and Tanya is grateful to be able to serve her patients at the U’s School of Medicine.

Our work has benefited greatly from the generosity, resources and collegiality provided to us by the U, its faculty, alumni and other benefactors. This support has enabled me to study, conserve and teach about the world’s endangered, biodiversity and helped Tanya to provide healthcare to the underserved people of this beautiful state.

We hope to “pay it forward” by providing a modest legacy gift for SBS. Planned gifts of this kind will help SBS continue to attract and support the best PhD students in biodiversity research, conservation biology, environmental science, ornithology and wildlife ecology during this time of rapid and devastating global change that requires all hands on deck.

We hope you will join us in making a legacy gift to the School of Biological Sciences.

Sincerely,
Çağan H. Şekercioğlu, PhD and Tanya M. Williams, MD